Publications

Sérandour AA, Avner S, Mahé EA, Madigou T, Guibert S, Weber M, Salbert G (2016). Single-CpG resolution mapping of 5-hydroxymethylcytosine by chemical labeling and exonuclease digestion identifies evolutionarily unconserved CpGs as TET targets. Genome Biol 17:56.

Scourzic L, Couronné L, Pedersen MT, Della Valle V, Diop M, Mylonas E, Calvo J, Mouly E, Lopez CK, Martin N, Fontenay M, Bender A, Guibert S, Dubreuil P, Dessen P, Droin N, Pflumio F, Weber M, Gaulard P, Helin K, Mercher T, Bernard OA (2016). DNMT3AR882H mutant and Tet2 inactivation cooperate in the deregulation of DNA methylation control to induce lymphoid malignancies in mice. Leukemia 30:1388-98.

Auclair G, Borgel J, Sanz LA, Vallet J, Guibert S, Dumas M, Cavelier P, Girardot M, Forné T, Feil R*, Weber M* (2016). EHMT2 directs DNA methylation for efficient gene silencing in mouse embryos. Genome Res 26:192-202.

Chen H, Aksoy I, Gonnot F, Osteil P, Aubry M, Hamela C, Rognard C, Hochard A, Voisin S, Fontaine E, Mure M, Afanassieff M, Cleroux E, Guibert S, Chen J, Vallot C, Acloque H, Genthon C, Donnadieu C, De Vos J, Sanlaville D, Guérin JF, Weber M, Stanton LW, Rougeulle C, Pain B, Bourillot PY, Savatier P (2015). Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency. Nature Commun 6:7095.

Brieño-Enríquez MA, García-López J, Cárdenas DB, Guibert S, Cleroux E, Ded L, Hourcade Jde D, Peknicová J, Weber M, Del Mazo J (2015). Exposure to Endocrine Disruptor Induces Transgenerational Epigenetic Deregulation of MicroRNAs in Primordial Germ Cells. PLoS One 10:e0124296.

Auclair G, Guibert S, Bender A, Weber M (2014). Ontogeny of CpG island methylation and specificity of DNMT3 methyltransferases during embryonic development in the mouse. Genome Biol 15:545.

del Mazo J, García-López J, Weber M (2014). Epigenetic traits of testicular cancer: from primordial germ cells to germ cell tumors. Epigenomics 6:253-255.

Bender A, Weber M (2013). DNA methylation: an identity card for brain cells. Genome Biol 14:131.

Guibert S, Weber M (2013). Functions of DNA Methylation and Hydroxymethylation in Mammalian Development. Curr Top Dev Biol 104:47-83.

Guibert S, Weber M (2012). Epigenetics: erase for a new start. Nature 492:363-4.

Tran VG, Court F, Duputié A, Antoine E, Aptel N, Milligan L, Carbonell F, Lelay-Taha MN, Piette J, Weber M, Montarras D, Pinset C, Dandolo L, Forné T, Cathala G (2012). H19 antisense RNA can up-regulate Igf2 transcription by activation of a novel promoter in mouse myoblasts. PLoS One 7:e37923.

Auclair G, Weber M (2012). Mechanisms of DNA methylation and demethylation in mammals. Biochimie 94:2202-11.

Guibert S, Forne T, Weber M (2012). Global profiling of DNA methylation erasure in mouse primordial germ cells. Genome Res 22:633-41.

Borgel J, Guibert S, Weber M (2012). Methylated DNA Immunoprecipitation (MeDIP) from low amounts of cells. Methods Mol Biol 925:149-58.

Salbert G, Weber M (2012). Tracking genomic hydroxymethylation by the base. Nature Methods 9:45-6.

Weber M (2011). DNA methylation, a key player in pluripotency. Med Sci 27:483-85.

Court F, Miro J, Braem C, Lelay-Taha MN, Brisebarre A, Atger F, Gostan T, Weber M, Cathala G, Forne T (2011). Modulated contact frequencies at gene-rich loci support a statistical helix model for mammalian chromatin organization. Genome Biol 12:R42.

Court F, Baniol M, Hagege H, Petit JS, Lelay-Taha MN, Carbonell F, Weber M, Cathala G, Forne T (2011). Long-range chromatin interactions at the mouse Igf2/H19 locus reveal a novel paternally expressed long non-coding RNA. Nucleic Acid Res 39:5893-5906.

Borgel J, Guibert S, Li Y, Chiba H, Schübeler D, Sasaki H, Forne T, Weber M (2010). Targets and dynamics of promoter DNA methylation during early mouse development. Nature Genet 42:1093-100.

Guibert S, Forne T, Weber M (2009). Dynamic regulation of DNA methylation during mammalian development. Epigenomics 1:81-98.

Mohn F, Weber M, Schübeler D, Roloff TC (2009). Methylated DNA Immunoprecipitation (MeDIP). Methods Mol Biol 507:55-64.

Martin-Subero JI, Kreuz M, Bibikova M, Bentink S, Ammerpohl O, Wickham-Garcia E, Rosolowski M, Richter J, Lopez-Serra L, Ballestar E, Berger H, Agirre X, Bernd HW, Calvanese V, Cogliatti SB, Drexler HG, Fan JB, Fraga MF, Hansmann ML, Hummel M, Klapper W, Korn B, Kuppers R, Macleod RA, Moller P, Ott G, Pott C, Prosper F, Rosenwald A, Schwaenen C, Schübeler D, Seifert M, Sturzenhofecker B, Weber M, Wessendorf S, Loeffler M, Trumper L, Stein H, Spang R, Esteller M, Barker D, Hasenclever D, Siebert R (2009). New insights into the biology and origin of mature aggressive B-cell lymphomas by combined epigenomic, genomic and transcriptional profiling. Blood 113:2488-97.

Weber M (2008). Profiles of DNA methylation in normal and cancer cells. Med Sci 24:731-4.

Mohn F, Weber M, Rebhan M, Roloff TC, Richter J, Stadler MB, Bibel M, Schübeler D (2008). Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Mol Cell 30:755-66.

Weber M and Schübeler D (2007). Genomic patterns of DNA methylation: targets and function of an epigenetic mark. Curr Opin Cell Biol 19:273-80.

Weber M, Hellmann I, Stadler MB, Ramos L,Pääbo S, Rebhan M, Schübeler D (2007). Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nature Genet 39:457-66.

Wilson IM, Davies JJ, Weber M, Brown CJ, Alvarez CE, MacAulay C, Schübeler D, Lam WL (2006). Epigenomics: mapping the methylome. Cell Cycle 5:155-58.

Weber M, Davies JJ, Wittig D, Oakeley EJ, Haase M, Lam WL, Schübeler D (2005). Chromosome-wide and promoter-specific analyses reveal sites of differential DNA methylation in normal and transformed human cells. Nature Genet 37:853-62.